Latest publications of CIBIO affiliates (last updated on June 1st, 2017)

Domenici E (2017) Schizophrenia genetics comes to translation. NPJ Schizophr, 3:10, doi:10.1038/s41537-017-0011-y.
http://www.ncbi.nlm.nih.gov/pubmed/28560256

Petris G, Casini A, Montagna C, Lorenzin F, Prandi D, Romanel A, Zasso J, Conti L, Demichelis F, Cereseto A (2017) Hit and go CAS9 delivered through a lentiviral based self-limiting circuit. Nat Commun, 8:15334, doi:10.1038/ncomms15334.
http://www.ncbi.nlm.nih.gov/pubmed/28530235

Bassi S, Tripathi T, Monziani A, Di Leva F, Biagioli M (2017) Epigenetics of Huntington's Disease. Adv. Exp. Med. Biol., 978:277-299, doi:10.1007/978-3-319-53889-1_15.
http://www.ncbi.nlm.nih.gov/pubmed/28523552

Huang FW, Mosquera JM, Garofalo A, Oh C, Baco M, Amin-Mansour A, Rabasha B, Bahl S, Mullane SA, Robinson BD, Aldubayan S, Khani F, Karir B, Kim E, Chimene-Weiss J, Hofree M, Romanel A, Osborne JR, Kim JW, Azabdaftari G, Woloszynska-Read A, Sfanos K, De Marzo AM, Demichelis F, Gabriel S, Van Allen EM, Mesirov J, Tamayo P, Rubin MA, Powell IJ, Garraway LA (2017) Exome Sequencing of African-American Prostate Cancer Reveals Loss-of-Function ERF Mutations. Cancer Discov, doi:10.1158/2159-8290.CD-16-0960.
http://www.ncbi.nlm.nih.gov/pubmed/28515055

Jiménez Garduño AM, Juárez-Hernández LJ, Polanco MJ, Tosatto L, Michelatti D, Arosio D, Basso M, Pennuto M, Musio C (2017) Altered ionic currents and amelioration by IGF-1 and PACAP in motoneuron-derived cells modelling SBMA. Biophys. Chem., doi:10.1016/j.bpc.2017.05.003.
http://www.ncbi.nlm.nih.gov/pubmed/28511915

Roncador A, Jimenez-Garduño AM, Pasquardini L, Giusti G, Cornella N, Lunelli L, Potrich C, Bartali R, Aversa L, Verucchi R, Serra MD, Caponi S, Iannotta S, Macchi P, Musio C (2017) Primary cortical neurons on PMCS TiO2 films towards bio-hybrid memristive device: A morpho-functional study. Biophys. Chem., doi:10.1016/j.bpc.2017.04.010.
http://www.ncbi.nlm.nih.gov/pubmed/28476206

Conteduca V, Wetterskog D, Sharabiani MTA, Grande E, Fernandez-Perez MP, Jayaram A, Salvi S, Castellano D, Romanel A, Lolli C, Casadio V, Gurioli G, Amadori D, Font A, Vazquez-Estevez S, González Del Alba A, Mellado B, Fernandez-Calvo O, Méndez-Vidal MJ, Climent MA, Duran I, Gallardo E, Rodriguez A, Santander C, Sáez MI, Puente J, Gasi Tandefelt D, Wingate A, Dearnaley D, PREMIERE Collaborators, Spanish Oncology Genitourinary Group, Demichelis F, De Giorgi U, Gonzalez-Billalabeitia E, Attard G (2017) Androgen receptor gene status in plasma DNA associates with worse outcome on enzalutamide or abiraterone for castration-resistant prostate cancer: a multi-institution correlative biomarker study. Ann. Oncol., doi:10.1093/annonc/mdx155.
http://www.ncbi.nlm.nih.gov/pubmed/28472366

Prandi D, Baca SC, Romanel A, Barbieri CE, Mosquera JM, Fontugne J, Beltran H, Sboner A, Garraway LA, Rubin MA, Demichelis F (2017) Erratum to: Unraveling the clonal hierarchy of somatic genomic aberrations. Genome Biol., 18(1):80, doi:10.1186/s13059-017-1183-5.
http://www.ncbi.nlm.nih.gov/pubmed/28464947

Ieropoulos I, Pasternak G, Greenman J (2017) Urine disinfection and in situ pathogen killing using a Microbial Fuel Cell cascade system. PLoS ONE, 12(5):e0176475, doi:10.1371/journal.pone.0176475.
http://www.ncbi.nlm.nih.gov/pubmed/28463976

Querin G, Martinelli I, Bertolin C, Pegoraro E, Pennuto M, Sorarù G (2017) The role of AR polyQ tract in male breast carcinoma: lesson from an SBMA case. Ann. Oncol., 28(5):1160-1161, doi:10.1093/annonc/mdx038.
http://www.ncbi.nlm.nih.gov/pubmed/28453707

Paiardi C, Mirzoyan Z, Zola S, Parisi F, Vingiani A, Pasini ME, Bellosta P (2017) The Stearoyl-CoA Desaturase-1 (Desat1) in Drosophila cooperated with Myc to Induce Autophagy and Growth, a Potential New Link to Tumor Survival. Genes (Basel), 8(5), doi:10.3390/genes8050131.
http://www.ncbi.nlm.nih.gov/pubmed/28452935

Bozzi Y, Provenzano G, Casarosa S (2017) Neurobiological bases of autism-epilepsy comorbidity: a focus on excitation/inhibition imbalance. Eur. J. Neurosci., doi:10.1111/ejn.13595.
http://www.ncbi.nlm.nih.gov/pubmed/28452083

Zerbini F, Zanella I, Fraccascia D, König E, Irene C, Frattini LF, Tomasi M, Fantappiè L, Ganfini L, Caproni E, Parri M, Grandi A, Grandi G (2017) Large scale validation of an efficient CRISPR/Cas-based multi gene editing protocol in Escherichia coli. Microb. Cell Fact., 16(1):68, doi:10.1186/s12934-017-0681-1.
http://www.ncbi.nlm.nih.gov/pubmed/28438207

Ibarra MS, Borini Etichetti C, Di Benedetto C, Rosano GL, Margarit E, Del Sal G, Mione M, Girardini J (2017) Dynamic regulation of Pin1 expression and function during zebrafish development. PLoS ONE, 12(4):e0175939, doi:10.1371/journal.pone.0175939.
http://www.ncbi.nlm.nih.gov/pubmed/28426725

Rossi A, Moro A, Tebaldi T, Cornella N, Gasperini L, Lunelli L, Quattrone A, Viero G, Macchi P (2017) Identification and dynamic changes of RNAs isolated from RALY-containing ribonucleoprotein complexes. Nucleic Acids Res., doi:10.1093/nar/gkx235.
http://www.ncbi.nlm.nih.gov/pubmed/28379492

Romanel A, Zhang T, Elemento O, Demichelis F (2017) EthSEQ: ethnicity annotation from whole exome sequencing data. Bioinformatics, doi:10.1093/bioinformatics/btx165.
http://www.ncbi.nlm.nih.gov/pubmed/28369222

Sasi M, Vignoli B, Canossa M, Blum R (2017) Erratum to: Neurobiology of local and intercellular BDNF signaling. Pflugers Arch., 469(5-6):611, doi:10.1007/s00424-017-1971-5.
http://www.ncbi.nlm.nih.gov/pubmed/28361353

Fedrizzi T, Meehan CJ, Grottola A, Giacobazzi E, Fregni Serpini G, Tagliazucchi S, Fabio A, Bettua C, Bertorelli R, De Sanctis V, Rumpianesi F, Pecorari M, Jousson O, Tortoli E, Segata N (2017) Genomic characterization of Nontuberculous Mycobacteria. Sci Rep, 7:45258, doi:10.1038/srep45258.
http://www.ncbi.nlm.nih.gov/pubmed/28345639

Querin G, Martinelli I, Bertolin C, Pegoraro E, Pennuto M, Sorarù G (2017) The role of AR polyQ tract in male breast carcinoma: lesson from a SBMA case. Ann. Oncol., doi:10.1093/annonc/mdx038.
http://www.ncbi.nlm.nih.gov/pubmed/28327982

Comisso E, Scarola M, Rosso M, Piazza S, Marzinotto S, Ciani Y, Orsaria M, Mariuzzi L, Schneider C, Schoeftner S, Benetti R (2017) OCT4 controls mitotic stability and inactivates the RB tumor suppressor pathway to enhance ovarian cancer aggressiveness. Oncogene, doi:10.1038/onc.2017.20.
http://www.ncbi.nlm.nih.gov/pubmed/28319064

Soares J, Espadinha M, Raimundo L, Ramos H, Gomes AS, Gomes S, Loureiro JB, Inga A, Reis F, Gomes C, Santos MMM, Saraiva L (2017) DIMP53-1: a novel small-molecule dual inhibitor of p53-MDM2/X interactions with multifunctional p53-dependent anticancer properties. Mol Oncol, doi:10.1002/1878-0261.12051.
http://www.ncbi.nlm.nih.gov/pubmed/28296148

Vignoli B, Canossa M (2017) Glioactive ATP controls BDNF recycling in cortical astrocytes. Commun Integr Biol, 10(1):e1277296, doi:10.1080/19420889.2016.1277296.
http://www.ncbi.nlm.nih.gov/pubmed/28289489

Godfrey C, Desviat LR, Smedsrød B, Piétri-Rouxel F, Denti MA, Disterer P, Lorain S, Nogales-Gadea G, Sardone V, Anwar R, El Andaloussi S, Lehto T, Khoo B, Brolin C, van Roon-Mom WM, Goyenvalle A, Aartsma-Rus A, Arechavala-Gomeza V (2017) Delivery is key: lessons learnt from developing splice-switching antisense therapies. EMBO Mol Med, 9(5):545-557, doi:10.15252/emmm.201607199.
http://www.ncbi.nlm.nih.gov/pubmed/28289078

Mansy SS (2017) Protocells: Non-living predators. Nat Chem, 9(2):107-108, doi:10.1038/nchem.2725.
http://www.ncbi.nlm.nih.gov/pubmed/28282047

Sasi M, Vignoli B, Canossa M, Blum R (2017) Neurobiology of local and intercellular BDNF signaling. Pflugers Arch., 469(5-6):593-610, doi:10.1007/s00424-017-1964-4.
http://www.ncbi.nlm.nih.gov/pubmed/28280960

Lentini R, Martín NY, Forlin M, Belmonte L, Fontana J, Cornella M, Martini L, Tamburini S, Bentley WE, Jousson O, Mansy SS (2017) Two-Way Chemical Communication between Artificial and Natural Cells. ACS Cent Sci, 3(2):117-123, doi:10.1021/acscentsci.6b00330.
http://www.ncbi.nlm.nih.gov/pubmed/28280778

Ghensi P, Bressan E, Gardin C, Ferroni L, Ruffato L, Caberlotto M, Soldini C, Zavan B (2017) Osteo Growth Induction titanium surface treatment reduces ROS production of mesenchymal stem cells increasing their osteogenic commitment. Mater Sci Eng C Mater Biol Appl, 74:389-398, doi:10.1016/j.msec.2016.12.032.
http://www.ncbi.nlm.nih.gov/pubmed/28254309

Salamin K, Eugster PJ, Jousson O, Waridel P, Grouzmann E, Monod M (2017) AoS28D, a proline-Xaa carboxypeptidase secreted by Aspergillus oryzae. Appl. Microbiol. Biotechnol., 101(10):4129-4137, doi:10.1007/s00253-017-8186-8.
http://www.ncbi.nlm.nih.gov/pubmed/28229206

Strati F, Cavalieri D, Albanese D, De Felice C, Donati C, Hayek J, Jousson O, Leoncini S, Renzi D, Calabrò A, De Filippo C (2017) New evidences on the altered gut microbiota in autism spectrum disorders. Microbiome, 5(1):24, doi:10.1186/s40168-017-0242-1.
http://www.ncbi.nlm.nih.gov/pubmed/28222761

Ebner DK, Tinganelli W, Helm A, Bisio A, Yamada S, Kamada T, Shimokawa T, Durante M (2017) The Immunoregulatory Potential of Particle Radiation in Cancer Therapy. Front Immunol, 8:99, doi:10.3389/fimmu.2017.00099.
http://www.ncbi.nlm.nih.gov/pubmed/28220126

Sood C, Marin M, Chande A, Pizzato M, Melikyan GB (2017) SERINC5 protein inhibits HIV-1 fusion pore formation by promoting functional inactivation of envelope glycoproteins. J. Biol. Chem., 292(14):6014-6026, doi:10.1074/jbc.M117.777714.
http://www.ncbi.nlm.nih.gov/pubmed/28179429

Hong TP, Carter MQ, Struffi P, Casonato S, Hao Y, Lam JS, Lory S, Jousson O (2017) Conjugative type IVb pilus recognizes lipopolysaccharide of recipient cells to initiate PAPI-1 pathogenicity island transfer in Pseudomonas aeruginosa. BMC Microbiol., 17(1):31, doi:10.1186/s12866-017-0943-4.
http://www.ncbi.nlm.nih.gov/pubmed/28173753

Truong DT, Tett A, Pasolli E, Huttenhower C, Segata N (2017) Microbial strain-level population structure and genetic diversity from metagenomes. Genome Res., 27(4):626-638, doi:10.1101/gr.216242.116.
http://www.ncbi.nlm.nih.gov/pubmed/28167665

Zeng Y, Navarro P, Shirali M, Howard DM, Adams MJ, Hall LS, Clarke TK, Thomson PA, Smith BH, Murray A, Padmanabhan S, Hayward C, Boutin T, MacIntyre DJ, Lewis CM, Wray NR, Mehta D, Penninx BW, Milaneschi Y, Baune BT, Air T, Hottenga JJ, Mbarek H, Castelao E, Pistis G, Schulze TG, Streit F, Forstner AJ, Byrne EM, Martin NG, Breen G, Müller-Myhsok B, Lucae S, Kloiber S, Domenici E, Major Depressive Disorder Working Group of the Psychiatric Genomics Consortium, Deary IJ, Porteous DJ, Haley CS, McIntosh AM (2016) Genome-wide Regional Heritability Mapping Identifies a Locus Within the TOX2 Gene Associated With Major Depressive Disorder. Biol. Psychiatry, doi:10.1016/j.biopsych.2016.12.012.
http://www.ncbi.nlm.nih.gov/pubmed/28153336

Bellon A, Iyer A, Bridi S, Lee FC, Ovando-Vázquez C, Corradi E, Longhi S, Roccuzzo M, Strohbuecker S, Naik S, Sarkies P, Miska E, Abreu-Goodger C, Holt CE, Baudet ML (2017) miR-182 Regulates Slit2-Mediated Axon Guidance by Modulating the Local Translation of a Specific mRNA. Cell Rep, 18(5):1171-1186, doi:10.1016/j.celrep.2016.12.093.
http://www.ncbi.nlm.nih.gov/pubmed/28147273

Asnicar F, Manara S, Zolfo M, Truong DT, Scholz M, Armanini F, Ferretti P, Gorfer V, Pedrotti A, Tett A, Segata N (2016) Studying Vertical Microbiome Transmission from Mothers to Infants by Strain-Level Metagenomic Profiling. mSystems, 2(1), doi:10.1128/mSystems.00164-16.
http://www.ncbi.nlm.nih.gov/pubmed/28144631